Characters from outside the general Teenage Mutant Ninja Turtles universes that have crossed paths with the TMNT characters at some point or another. See also Category:Spinoff characters.
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- Ken Masters
- Mekaneck (character)
- Mer-Man (character)
- Mighty Morphin Power Rangers
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- Miyamoto Usagi (2003 TV series)
- Miyamoto Usagi (2012 TV series)
- James Moriarty
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- Moss Man (character)
- Fox Mulder
- Murakami Gennosuke (2012 TV series)
- Murakami Gennosuke (comics)
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- Mystic Hand
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- Jason Lee Scott
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- Shub Niggurath
- Snout Spout (character)
- Sonic
- Sorceress
- The Spleen
- Splinter Rabbid
- SpongeBob SquarePants
- Squatt
- Star Shark
- Stinkor (character)
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- Stratos (character)
- Ronnie Strickland
- Boo Swain
- Sy-Klone (character)
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